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Identification of a mechanism-based binding mode for a histone deacetylase 6 inhibitor - PubMed

5 hours ago
  • #HDAC6 inhibitor
  • #mechanism-based binding
  • #species selectivity
  • BAS-2 is a selective HDAC6 inhibitor with an isothiouronium core and lacks a zinc-binding group.
  • The inhibitor shows species selectivity, potently inhibiting human HDAC6 but not zebrafish HDAC6, due to Asp567 in human HDAC6.
  • X-ray crystallography and mutagenesis revealed a mechanism-based binding mode involving thiolate-zinc coordination in a variant.
  • Using BAS-2's binding orientation, a proteolysis targeting chimera was designed to induce proteasome-dependent HDAC6 degradation.
  • The findings provide insights for developing next-generation selective HDAC6 inhibitors and degraders.